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论文题名： Multiscale footprints reveal the organization of cis-regulatory elements
期刊与年份： Nature，2025。论文原文。
范围为正文全部编号主图及其子图，包含流程示意图。Exte ...
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论文题名： Sequence basis of transcription initiation in the human genome
期刊与年份： Science，2024。论文原文。
范围为正文全部编号主图及其子图，包含流程示意图。Extended Data ...
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论文题名： DanQ: a hybrid convolutional and recurrent deep neural network for quantifying the function of DNA sequences
期刊与年份： Nucleic Ac ...
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论文题名： Base-resolution models of transcription-factor binding reveal soft motif syntax
期刊与年份： Nature Genetics，2021。论文原文。
范围为正文全部编号主图及 ...
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论文题名： Sequential regulatory activity prediction across chromosomes with convolutional neural networks
期刊与年份： Genome Research，2018。论文 ...
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论文题名： Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks
期刊与年份： Genome Research，2 ...
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论文题名： gReLU: a comprehensive framework for DNA sequence modeling and design
期刊与年份： Nature Methods，2025。论文原文。
范围为正文全部编号主图及其子图，包含流程示意图 ...
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论文题名： A DNA language model based on multispecies alignment predicts the effects of genome-wide variants
期刊与年份： Nature Biotechnology， ...
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论文题名： Annotating the genome at single-nucleotide resolution with DNA foundation models
期刊与年份： Nature Methods，2025。论文原文。
范围为正文全部编号主图及 ...
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论文题名： Regulatory grammar in human promoters uncovered by MPRA-based deep learning
期刊与年份： Nature，2026。论文原文。
范围为正文全部编号主图及其子图，包含流程示意图。E ...
